Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796068.1_cds_XP_016447440.1_4142
CDS Infomation

[gene=LOC107772442] [db_xref=GeneID:107772442] [protein=phospholipase D alpha 1-like] [protein_id=XP_016447440.1] [location=join(142430..142522,144554..146453,146897..147336)] [gbkey=CDS]
Sequence

ATGGCTCCTATTCTGCTTCATGGTACTCTGCATGTCACTGTACACGAGGTTGATAGGCTA
CGCGAGAAGGGCGGTGGCAACTTCTTCAGCAAGATTAAAGAGACCGTCGAGGAGACTGTA
GGTGTTGGCAAAGGAGCTTCTAAAATATATGCCACAGTTGATTTGGAAAAGGCAAGGGTT
GGAAGAACCAGAGTCATTGAAAATGAACCAAGCAATCCTAGGTGGAATGAGTCGTTTCAC
ATCTACTGCGCTCATATGGCTTCAAATGTTGTATTCACAGTCAAAGATAACAATTCCATT
GGTGCAACCTTAATTGGAAGAGCTTATTTACCTGTTAATGAACTCTTGGAAGGGGAAGAA
GTTGATGAATGGATTGAGATACTGGATGAAGACAAGAATCCCATAAAAGAAGGTTCTAAG
ATCCATGTGAGGCTACAGTTCTTTGATATCAGTCGAGATCGTAATTGGGGACATGGAATA
GGTAATCCTAAATATCCTGGTGTCCCTTACACTTTCTTCCCACAGAGATCAGGATGTCGT
GTTTCTTTGTATCAAGATGCACATATCCCTGACAAATTTATTCCTAAAATCCCTCTATCG
GGGGGTAAATATTATGAACCGCATAGATGTTGGGAAGATGTGTTTGATGCGATTACAAAT
GCAAAGCACTTGATTTACATTACTGGCTGGTCTGTATATACTGAAATAAACTTGTTGAGA
GATTCGAGGAGGCAAAAGCCTGGAGGAGATATCACACTCGGAGAGCTGCTCAAGAAGAAG
GCGAGTGATGGCGTTAAAGTACTTATGCTTGTATGGGATGACAGAACATCTGTACGTCTG
CTGAAGAAGGATGGTCTTATGGCCACTCATGACGAAGAAACTGAAGAGTTCTTTAAAGGT
ACTGACGTGCACTGTGTACTTTGCCCTCGGGATCCTGATGATGGTGGAAGCATAGTTAAG
GATTTACAAATCTCTACCATGTTTACTCATCACCAGAAACTCGTAATAGTGGACAGTGAC
ATGCCCAATGGCGAATCAGACATGAGGAGGATTGTGAGTTTTGTTGGTGGCATTGATCTT
TGTGATGGGAGATACGATACACCTTTCCATTCACTTTTTAGAACACTGGACACTGCACAC
CACGATGATTTCCACCAGCCTAATTTTGCTGAGGCTTCGATTACCAAAGGTGGGCCTAGG
GAGCCCTGGCATGACATTCACTCTCGAGTTGAAGGACCAATTGCTTGGGATGTTCTGTTT
AATTTTGAGCAGAGATGGAGAAAACAAGGTGGAAAAGATATTCTTGTCAACTTAAGAGAG
CTTGACAATGTTATCATTCCACCATCTCCAGTTATGTATCCAGATGATCCTGAAACATGG
AATGTTCAGTTATTCAGATCTATCGATGGCGGGGCAGCTTTTGGTTTTCCTGACACACCC
GAAGATGCAGCAAAGGCGGGTCTAGTGAGTGGCAAAGATAACATAGTCGATAGAAGTATT
CAGGATGCTTATATCACTGCTATTCGTCGGGCAAAGAATTTCATTTACATTGAAAATCAG
TATTTTCTTGGAAGCTGTTACGATTGGCAGTGTGATGATGTGAAAGTAGAGGAGATAGGT
GCTTTGCATCTCATTCCAAAAGAACTTACGTTGAAGATTGTGAGTAAGATTGAAGCAGGG
GAAAGGTTTACAGTATATGTTCTGGTTCCAATGTGGCCAGAAGGAATTCCTGAGAGTGCA
TCCGTACAAGCAATATTAGATTGGCAAAAGAGGACAATGGAAATGATGTATAAACATATA
TTTCAGGCTATCAGAGATAAAGGTACTGACGACCACCCCAGGAATTATTTGACCTTTTTC
TGCATTGGTAATCGGGAAATGAAGAAGAGCGGAGAATATGAACCTTCAGAAAAGCCAGAG
CCTGATTCTGATTATGAGCGAGCTCAGGAAGCTCGTCGCTTCATGATCTATGTCCATTCC
AAGATGATGATTGTTGATGATGAGTACATCATAGTTGGATCAGCCAACATAAACCAGAGG
TCCATGGACGGCGCGAGAGATTCTGAGATAGCAATTGGAGCGTACCAGCCTCATCATTTA
ACGACAAGTCAACCAGCACGGGGTCAAGTTCATGGTTTCAGAATGGCATTGTGGTACGAG
CACATGGGTATGCTTGACGACACCTTCCAACATCCAGAAAGTGAGGAATGCGTGAAGAAG
GTGAATCAAATAGCTGATAAATACTGGGATCTTTATACAAGTGAGAGTCTAGACAGTGAT
CTGCCTGGTCACTTGCTCAGATACCCCGTTGGACTTACAAACAATGGGGATATCACGGAT
TTGCCAGGAGATGGAAATGAGTTCTTCCCTGACACTAAGGCCAAGGTTGTTGGTACTAAA
TCTGACTACCTTCCTCCTATCCTCACTACATAA

Peptide Sequence

PEP ID

XP_016447440.1
PEP Infomation

PREDICTED: phospholipase D alpha 1-like [Nicotiana tabacum]
Sequence

MAPILLHGTLHVTVHEVDRLREKGGGNFFSKIKETVEETVGVGKGASKIYATVDLEKARV
GRTRVIENEPSNPRWNESFHIYCAHMASNVVFTVKDNNSIGATLIGRAYLPVNELLEGEE
VDEWIEILDEDKNPIKEGSKIHVRLQFFDISRDRNWGHGIGNPKYPGVPYTFFPQRSGCR
VSLYQDAHIPDKFIPKIPLSGGKYYEPHRCWEDVFDAITNAKHLIYITGWSVYTEINLLR
DSRRQKPGGDITLGELLKKKASDGVKVLMLVWDDRTSVRLLKKDGLMATHDEETEEFFKG
TDVHCVLCPRDPDDGGSIVKDLQISTMFTHHQKLVIVDSDMPNGESDMRRIVSFVGGIDL
CDGRYDTPFHSLFRTLDTAHHDDFHQPNFAEASITKGGPREPWHDIHSRVEGPIAWDVLF
NFEQRWRKQGGKDILVNLRELDNVIIPPSPVMYPDDPETWNVQLFRSIDGGAAFGFPDTP
EDAAKAGLVSGKDNIVDRSIQDAYITAIRRAKNFIYIENQYFLGSCYDWQCDDVKVEEIG
ALHLIPKELTLKIVSKIEAGERFTVYVLVPMWPEGIPESASVQAILDWQKRTMEMMYKHI
FQAIRDKGTDDHPRNYLTFFCIGNREMKKSGEYEPSEKPEPDSDYERAQEARRFMIYVHS
KMMIVDDEYIIVGSANINQRSMDGARDSEIAIGAYQPHHLTTSQPARGQVHGFRMALWYE
HMGMLDDTFQHPESEECVKKVNQIADKYWDLYTSESLDSDLPGHLLRYPVGLTNNGDITD
LPGDGNEFFPDTKAKVVGTKSDYLPPILTT

Transcript Sequence

Gene sequence data has not been registered.